24 Commits

Author SHA1 Message Date
nou 87d65a31fc Release 0.2.12 2024-03-23 09:21:33 +01:00
nou f704b9f041 Fix wrong bracket position 2024-03-21 18:12:25 +01:00
nou c1e986080c Don't use replace to update attachement position 2024-03-21 16:52:25 +01:00
nou 4db1d86530 Add support for subblocks to handle +2GiB compressed images 2024-03-17 14:40:54 +01:00
nou 899fe98233 Fix bug with writing ICCProfile 2024-03-17 14:14:03 +01:00
nou 67887bd4c8 Workaround for windows where it can't read more than 2 GiB 2024-03-14 22:34:16 +01:00
nou e3ba8eedd8 Use std::stoull 2024-03-12 23:03:54 +01:00
nou bf690339b4 Workaround for gcc 10 2024-02-08 22:51:08 +01:00
nou 033a34e248 Add F32Matrix and F64Matrix into toString 2024-01-22 21:23:46 +01:00
nou cf9c903a90 Update version in CMakeLists.txt 2024-01-20 08:02:10 +01:00
nou aa356443d3 Convert aperture and focal length from mm to meters. 2024-01-05 16:15:30 +01:00
nou 16676540b4 Fix not loading String properties 2024-01-05 16:14:29 +01:00
nou bae3edd12a Resolve some erros for MSVC 2023-12-20 15:28:43 +01:00
nou c848ba75ff Fix typo in README 2023-12-02 14:35:01 +01:00
nou 8a1f305cc7 Fix incorrect header size 2023-10-16 19:17:04 +02:00
nou 8e05a58610 Version 0.2.9 2023-08-13 19:13:39 +02:00
nou 0b0c865df0 Support for ZSTD 2023-07-03 17:31:29 +02:00
nou a675e97e0b Release 0.2.8 2023-06-13 12:25:13 +02:00
nou 6028354c61 Remove linking against zstd 2023-06-12 23:41:48 +02:00
nou 467af80cb3 Fix reading ICCprofile 2023-06-05 12:21:27 +02:00
nou 76ee3f361c Release 0.2.6 2023-06-02 08:50:37 +02:00
nou cde2fc9a17 Fix "string sub-command REPLACE requires at least four arguments" 2023-05-31 14:56:26 +02:00
nou 0ddff094ef Fix generating pkgconfig file 2023-05-29 23:16:53 +02:00
nou 5dcc383090 Fix generating pkgconfig file 2023-05-29 22:59:24 +02:00
9 changed files with 311 additions and 71 deletions
+13 -1
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@@ -1,6 +1,6 @@
cmake_minimum_required(VERSION 3.14)
project(libXISF VERSION 0.2.5 LANGUAGES CXX C
project(libXISF VERSION 0.2.12 LANGUAGES CXX C
HOMEPAGE_URL https://gitea.nouspiro.space/nou/libXISF
DESCRIPTION "LibXISF is C++ library that can read and write XISF files produced by PixInsight.")
@@ -94,6 +94,12 @@ endif(USE_BUNDLED_LIBS)
set_target_properties(XISF PROPERTIES VERSION ${PROJECT_VERSION} SOVERSION ${PROJECT_VERSION_MAJOR})
pkg_check_modules(ZSTD libzstd IMPORTED_TARGET)
if(ZSTD_FOUND)
target_compile_definitions(XISF PRIVATE HAVE_ZSTD)
target_link_libraries(XISF PUBLIC PkgConfig::ZSTD)
endif(ZSTD_FOUND)
if(BUILD_SHARED_LIBS)
target_compile_definitions(XISF PRIVATE LIBXISF_LIBRARY)
else(BUILD_SHARED_LIBS)
@@ -108,6 +114,12 @@ install(FILES ${XISF_PUBLIC_HEADERS} DESTINATION ${CMAKE_INSTALL_INCLUDEDIR})
install(FILES ${CMAKE_CURRENT_BINARY_DIR}/libxisf.pc DESTINATION ${CMAKE_INSTALL_LIBDIR}/pkgconfig)
install(TARGETS XISF LIBRARY DESTINATION ${CMAKE_INSTALL_LIBDIR})
list(JOIN PC_LIBS_REQUIRE ", " PC_REQUIRE_STR2)
if(NOT PC_REQUIRE_STR2 STREQUAL "")
string(REPLACE "lz4" "liblz4" PC_REQUIRE_STR ${PC_REQUIRE_STR2})
endif()
list(TRANSFORM PC_LIBS_REQUIRE PREPEND "-l")
list(JOIN PC_LIBS_REQUIRE " " PC_LIBS_STR)
configure_file(libxisf.pc.in libxisf.pc @ONLY)
#testing
+1 -1
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@@ -9,7 +9,7 @@ To compile simply run these commands
```
cmake -B build -S .
cmake --build build --parallel
cmake --install .
cmake --install build
```
By default it use bundled libraries. If you wish to use external libraries you will may add
+224 -53
View File
@@ -27,6 +27,9 @@
#include <lz4hc.h>
#include <pugixml.hpp>
#include <zlib.h>
#ifdef HAVE_ZSTD
#include <zstd.h>
#endif
#include "streambuffer.h"
namespace LibXISF
@@ -46,6 +49,7 @@ static std::unordered_map<Image::ColorSpace, String> colorSpaceToString;
static DataBlock::CompressionCodec compressionCodecOverride = DataBlock::None;
static bool byteShuffleOverride = false;
static int compressionLevelOverride = -1;
const size_t GiB = 1073741824;
static const std::unordered_map<String, std::pair<String, Variant::Type>> fitsNameToPropertyIdTypeConvert = {
{"OBSERVER", {"Observer:Name", Variant::Type::String}},
@@ -83,12 +87,12 @@ static void byteShuffle(ByteArray &data, int itemSize)
{
ByteArray &input = data;
ByteArray output(input.size());
int num = input.size() / itemSize;
size_t num = input.size() / itemSize;
char *s = output.data();
for(int i=0; i<itemSize; i++)
{
const char *u = input.constData() + i;
for(int o=0; o<num; o++, s++, u += itemSize)
for(size_t o=0; o<num; o++, s++, u += itemSize)
*s = *u;
}
memcpy(s, input.constData() + num * itemSize, input.size() % itemSize);
@@ -102,12 +106,12 @@ static void byteUnshuffle(ByteArray &data, int itemSize)
{
ByteArray &input = data;
ByteArray output(input.size());
int num = input.size() / itemSize;
size_t num = input.size() / itemSize;
const char *s = input.constData();
for(int i=0; i<itemSize; i++)
{
char *u = output.data() + i;
for(int o=0; o<num; o++, s++, u += itemSize)
for(size_t o=0; o<num; o++, s++, u += itemSize)
*u = *s;
}
memcpy(output.data() + num * itemSize, s, input.size() % itemSize);
@@ -124,6 +128,9 @@ void DataBlock::decompress(const ByteArray &input, const String &encoding)
else if(encoding == "base16")
tmp.decodeHex();
if(subblocks.size() == 0)
subblocks.push_back({tmp.size(), uncompressedSize});
switch(codec)
{
case None:
@@ -132,17 +139,54 @@ void DataBlock::decompress(const ByteArray &input, const String &encoding)
case Zlib:
{
data.resize(uncompressedSize);
uLongf size = uncompressedSize;
::uncompress((Bytef*)data.data(), &size, (Bytef*)tmp.data(), tmp.size());
const char *srcPtr = tmp.constData();
char *dstPtr = data.data();
for(auto &block : subblocks)
{
uLongf size = block.second;
::uncompress((Bytef*)dstPtr, &size, (const Bytef*)srcPtr, block.first);
srcPtr += block.first;
dstPtr += block.second;
}
break;
}
case LZ4:
case LZ4HC:
{
data.resize(uncompressedSize);
if(LZ4_decompress_safe(tmp.constData(), data.data(), tmp.size(), data.size()) < 0)
const char *srcPtr = tmp.constData();
char *dstPtr = data.data();
for(auto &block : subblocks)
{
if(LZ4_decompress_safe(srcPtr, dstPtr, block.first, block.second) < 0)
throw Error("LZ4 decompression failed");
srcPtr += block.first;
dstPtr += block.second;
}
break;
}
case ZSTD:
#ifdef HAVE_ZSTD
{
data.resize(uncompressedSize);
const char *srcPtr = tmp.constData();
char *dstPtr = data.data();
for(auto &block : subblocks)
{
if(ZSTD_isError(ZSTD_decompress(dstPtr, block.second, srcPtr, block.first)))
throw Error("ZSTD decompression failed");
srcPtr += block.first;
dstPtr += block.second;
}
}
#else
throw Error("ZSTD support not compiled");
#endif
break;
}
subblocks.clear();
byteUnshuffle(data, byteShuffling);
attachmentPos = 0;
@@ -169,31 +213,78 @@ void DataBlock::compress(int sampleFormatSize)
break;
case Zlib:
{
data.resize(compressBound(uncompressedSize));
uLongf compressedSize = data.size();
if(::compress2((Bytef*)data.data(), &compressedSize, (Bytef*)tmp.data(), tmp.size(), compressLevel) != Z_OK)
int64_t size = tmp.size();
int64_t compSize = 0;
int64_t inPtr = 0;
while(inPtr < size)
{
int64_t inSize = UINT32_MAX < size - inPtr ? UINT32_MAX : size - inPtr;
data.resize(compSize + compressBound(inSize));
uLongf outSize = data.size() - compSize;
if(::compress2((Bytef*)data.data() + compSize, &outSize, (const Bytef*)tmp.constData() + inPtr, inSize, compressLevel) != Z_OK)
throw Error("Zlib compression failed");
data.resize(compressedSize);
compSize += outSize;
inPtr += inSize;
subblocks.push_back({outSize, inSize});
}
data.resize(compSize);
break;
}
case LZ4:
case LZ4HC:
{
int compSize = 0;
data.resize(LZ4_compressBound(tmp.size()));
if(codec == LZ4)
compSize = LZ4_compress_default(tmp.constData(), data.data(), tmp.size(), data.size());
else
compSize = LZ4_compress_HC(tmp.constData(), data.data(), tmp.size(), data.size(), compressLevel < 0 ? LZ4HC_CLEVEL_DEFAULT : compressLevel);
int64_t size = tmp.size();
int64_t compSize = 0;
int64_t inPtr = 0;
while(inPtr < size)
{
int64_t inSize = LZ4_MAX_INPUT_SIZE < size - inPtr ? LZ4_MAX_INPUT_SIZE : size - inPtr;
data.resize(compSize + LZ4_compressBound(inSize));
int outSize = 0;
if(compSize <= 0)
if(codec == LZ4)
outSize = LZ4_compress_default(tmp.constData() + inPtr, data.data() + compSize, inSize, data.size() - compSize);
else
outSize = LZ4_compress_HC(tmp.constData() + inPtr, data.data() + compSize, inSize, data.size() - compSize, compressLevel < 0 ? LZ4HC_CLEVEL_DEFAULT : compressLevel);
if(outSize <= 0)
throw Error("LZ4 compression failed");
compSize += outSize;
inPtr += inSize;
subblocks.push_back({outSize, inSize});
}
data.resize(compSize);
break;
}
case ZSTD:
{
#ifdef HAVE_ZSTD
size_t compSize = 0;
data.resize(ZSTD_compressBound(uncompressedSize));
compSize = ZSTD_compress(data.data(), data.size(), tmp.data(), tmp.size(), compressLevel < 0 ? ZSTD_CLEVEL_DEFAULT : compressLevel);
if(ZSTD_isError(compSize))
throw Error("ZSTD compression failed");
data.resize(compSize);
#else
throw Error("ZSTD support not compiled");
#endif
break;
}
}
}
bool DataBlock::CompressionCodecSupported(CompressionCodec codec)
{
(void)codec;
#ifndef HAVE_ZSTD
if(codec == ZSTD)
return false;
#endif
return true;
}
Property::Property(const String &_id, const char *_value) :
id(_id),
@@ -352,6 +443,10 @@ bool Image::addFITSKeywordAsProperty(const String &name, const String &value)
{
auto &c = fitsNameToPropertyIdTypeConvert.at(name);
Property prop(c.first, variantFromString(c.second, value));
if(name == "APTDIA" || name == "FOCALLEN")
prop.value.value<LibXISF::Float32>() /= 1000.0f;
updateProperty(prop);
return true;
}
@@ -541,6 +636,7 @@ private:
FITSKeyword parseFITSKeyword(const pugi::xml_node &node);
ColorFilterArray parseCFA(const pugi::xml_node &node);
Image parseImage(const pugi::xml_node &node);
void readAttachment(DataBlock &dataBlock);
std::unique_ptr<std::istream> _io;
std::unique_ptr<StreamBuffer> _buffer;
@@ -595,10 +691,7 @@ const Image& XISFReaderPrivate::getImage(uint32_t n, bool readPixels)
Image &img = _images[n];
if(img._dataBlock.attachmentPos && readPixels)
{
_io->seekg(img._dataBlock.attachmentPos);
ByteArray data(img._dataBlock.attachmentSize);
_io->read(data.data(), data.size());
img._dataBlock.decompress(data);
readAttachment(img._dataBlock);
}
return img;
}
@@ -665,10 +758,14 @@ void XISFReaderPrivate::parseCompression(const pugi::xml_node &node, DataBlock &
dataBlock.codec = DataBlock::LZ4HC;
else if(compression[0].find("lz4") == 0)
dataBlock.codec = DataBlock::LZ4;
#ifdef HAVE_ZSTD
else if(compression[0].find("zstd") == 0)
dataBlock.codec = DataBlock::ZSTD;
#endif
else
throw Error("Unknown compression codec");
dataBlock.uncompressedSize = std::stoul(compression[1]);
dataBlock.uncompressedSize = std::stoull(compression[1]);
if(compression[0].find("+sh") != std::string::npos)
{
@@ -677,6 +774,18 @@ void XISFReaderPrivate::parseCompression(const pugi::xml_node &node, DataBlock &
else
throw Error("Missing byte shuffling size");
}
if(node.attribute("subblocks"))
{
std::vector<std::string> subblocks = splitString(node.attribute("subblocks").as_string(), ':');
for(auto &block : subblocks)
{
size_t pos = 0;
size_t comp = std::stoull(block, &pos);
size_t deco = std::stoull(block.substr(pos+1));
dataBlock.subblocks.push_back({comp, deco});
}
}
}
}
@@ -698,8 +807,8 @@ DataBlock XISFReaderPrivate::parseDataBlock(const pugi::xml_node &node)
}
else if(location.size() >= 3 && location[0] == "attachment")
{
dataBlock.attachmentPos = std::stoul(location[1]);
dataBlock.attachmentSize = std::stoul(location[2]);
dataBlock.attachmentPos = std::stoull(location[1]);
dataBlock.attachmentSize = std::stoull(location[2]);
}
else
{
@@ -734,17 +843,10 @@ Property XISFReaderPrivate::parseProperty(const pugi::xml_node &node)
{
DataBlock dataBlock = parseDataBlock(node);
if(dataBlock.attachmentPos)
{
data.resize(dataBlock.attachmentSize);
_io->seekg(dataBlock.attachmentPos);
_io->read(data.data(), dataBlock.attachmentSize);
dataBlock.decompress(data);
}
else
{
readAttachment(dataBlock);
data = dataBlock.data;
}
}
deserializeVariant(node, property.value, data);
@@ -782,9 +884,9 @@ Image XISFReaderPrivate::parseImage(const pugi::xml_node &node)
std::vector<std::string> geometry = splitString(node.attribute("geometry").as_string(), ':');
if(geometry.size() != 3)throw Error("We support only 2D images");
image._width = std::stoul(geometry[0]);
image._height = std::stoul(geometry[1]);
image._channelCount = std::stoul(geometry[2]);
image._width = std::stoull(geometry[0]);
image._height = std::stoull(geometry[1]);
image._channelCount = std::stoull(geometry[2]);
if(!image._width || !image._height || !image._channelCount)throw Error("Invalid image geometry");
std::vector<std::string> bounds = splitString(node.attribute("bounds").as_string(), ':');
@@ -812,6 +914,9 @@ Image XISFReaderPrivate::parseImage(const pugi::xml_node &node)
if(node.child("ICCProfile"))
{
DataBlock icc = parseDataBlock(node.child("ICCProfile"));
if(icc.attachmentPos)
readAttachment(icc);
image._iccProfile = icc.data;
}
@@ -821,6 +926,22 @@ Image XISFReaderPrivate::parseImage(const pugi::xml_node &node)
return image;
}
void XISFReaderPrivate::readAttachment(DataBlock &dataBlock)
{
ByteArray data(dataBlock.attachmentSize);
_io->seekg(dataBlock.attachmentPos);
size_t size = dataBlock.attachmentSize;
char *ptr = data.data();
while(size > 0)
{
size_t s = std::min(size, GiB);
_io->read(ptr, s);
size -= s;
ptr += s;
}
dataBlock.decompress(data);
}
class XISFWriterPrivate
{
public:
@@ -835,6 +956,7 @@ private:
void writePropertyElement(pugi::xml_node &node, const Property &property);
void writeFITSKeyword(pugi::xml_node &node, const FITSKeyword &keyword);
void writeMetadata(pugi::xml_node &node);
void updateImageAttachmentPos(pugi::xml_node &root, size_t offset);
ByteArray _xisfHeader;
ByteArray _attachmentsData;
std::vector<Image> _images;
@@ -866,7 +988,15 @@ void XISFWriterPrivate::save(std::ostream &io)
for(auto &image : _images)
{
io.write(image._dataBlock.data.constData(), image._dataBlock.data.size());
const char *ptr = image._dataBlock.data.constData();
size_t size = image._dataBlock.data.size();
while(size > 0)
{
size_t s = std::min(size, GiB);
io.write(ptr, s);
ptr += s;
size -= s;
}
}
}
@@ -897,25 +1027,26 @@ void XISFWriterPrivate::writeHeader()
writeMetadata(root);
uint32_t size = 0;
std::string header;
while(true)
{
std::stringstream xml;
xml.write(signature, sizeof(signature));
doc.save(xml, "", pugi::format_raw);
std::string header = xml.str();
uint32_t size = header.size();
uint32_t offset = 0;
std::string replace = "attachment:2147483648";
for(auto &image : _images)
header = xml.str();
if(size != header.size())
{
std::string blockPos = std::string("attachment:") + std::to_string(size + offset);
size_t pos = header.find(replace, 32);
header.replace(pos, replace.size(), blockPos);
offset += image._dataBlock.data.size();
size = header.size();
updateImageAttachmentPos(root, size);
}
else
{
break;
}
}
uint32_t headerSize = size - sizeof(signature);
header.resize(size, 0);
uint32_t headerSize = header.size() - sizeof(signature);
header.replace(8, sizeof(uint32_t), (const char*)&headerSize, sizeof(uint32_t));
_xisfHeader = ByteArray(header.c_str(), header.size());
@@ -955,7 +1086,8 @@ void XISFWriterPrivate::writeImageElement(pugi::xml_node &node, const Image &ima
if(image._iccProfile.size())
{
ByteArray base64 = image._iccProfile;
base64.decodeBase64();
base64.encodeBase64();
base64.append('\0');
pugi::xml_node icc_node = image_node.append_child("ICCProfile");
icc_node.append_attribute("location").set_value("inline:base64");
icc_node.append_child(pugi::node_pcdata).set_value(base64.data());
@@ -974,7 +1106,10 @@ void XISFWriterPrivate::writeDataBlockAttributes(pugi::xml_node &image_node, con
}
else
{
std::string attachment = "attachment:2147483648:" + std::to_string(dataBlock.data.size());
std::string attachment = "attachment:";
if(dataBlock.attachmentPos == 0) attachment += "99999";
else attachment += std::to_string(dataBlock.attachmentPos);
attachment += ":" + std::to_string(dataBlock.data.size());
image_node.append_attribute("location").set_value(attachment.c_str());
}
@@ -986,6 +1121,12 @@ void XISFWriterPrivate::writeDataBlockAttributes(pugi::xml_node &image_node, con
codec = "lz4";
else if(dataBlock.codec == DataBlock::LZ4HC)
codec = "lz4hc";
else if(dataBlock.codec == DataBlock::ZSTD)
#ifdef HAVE_ZSTD
codec = "zstd";
#else
throw Error("ZSTD support not compiled");
#endif
if(dataBlock.byteShuffling > 1)
codec += "+sh";
@@ -998,6 +1139,19 @@ void XISFWriterPrivate::writeDataBlockAttributes(pugi::xml_node &image_node, con
image_node.append_attribute("compression").set_value(codec.c_str());
}
if(!dataBlock.subblocks.empty())
{
std::string subblocks;
for(auto i = dataBlock.subblocks.begin(); i != dataBlock.subblocks.end(); i++)
{
if(i != dataBlock.subblocks.begin())
subblocks += ":";
subblocks += std::to_string(i->first) + "," + std::to_string(i->second);
}
image_node.append_attribute("subblocks").set_value(subblocks.c_str());
}
}
void XISFWriterPrivate::writePropertyElement(pugi::xml_node &node, const Property &property)
@@ -1028,6 +1182,19 @@ void XISFWriterPrivate::writeMetadata(pugi::xml_node &node)
writePropertyElement(metadata, Property("XISF:CreatorApplication", "LibXISF"));
}
void XISFWriterPrivate::updateImageAttachmentPos(pugi::xml_node &root, size_t offset)
{
pugi::xpath_node_set imageNodes = root.select_nodes("//Image");
int i = 0;
for(auto &image : _images)
{
pugi::xml_node node = imageNodes[i++].node();
std::string location = "attachment:" + std::to_string(offset) + ":" + std::to_string(image._dataBlock.data.size());
offset += image._dataBlock.data.size();
node.attribute("location").set_value(location.c_str());
}
}
XISFReader::XISFReader()
{
p = new XISFReaderPrivate;
@@ -1147,6 +1314,10 @@ struct Init
compressionCodecOverride = DataBlock::LZ4HC;
else if(compression.find("lz4") == 0)
compressionCodecOverride = DataBlock::LZ4;
#ifdef HAVE_ZSTD
else if(compression.find("zstd") == 0)
compressionCodecOverride = DataBlock::ZSTD;
#endif
if(compression.find("+sh") != std::string::npos)
byteShuffleOverride = true;
+5 -1
View File
@@ -172,18 +172,22 @@ struct LIBXISF_EXPORT DataBlock
None,
Zlib,
LZ4,
LZ4HC
LZ4HC,
ZSTD
};
bool embedded = false;
uint32_t byteShuffling = 0;
uint64_t attachmentPos = 0;
uint64_t attachmentSize = 0;
uint64_t uncompressedSize = 0;
std::vector<std::pair<uint64_t, uint64_t>> subblocks;
CompressionCodec codec = None;
int compressLevel = -1;
ByteArray data;
void decompress(const ByteArray &input, const std::string &encoding = "");
void compress(int sampleFormatSize);
/// ZSTD compression can be disabled at compile time
static bool CompressionCodecSupported(CompressionCodec codec);
};
struct LIBXISF_EXPORT Property
+1 -2
View File
@@ -7,7 +7,6 @@ Name: @PROJECT_NAME@
Description: @CMAKE_PROJECT_DESCRIPTION@
URL: @CMAKE_PROJECT_HOMEPAGE_URL@
Version: @PROJECT_VERSION@
Requires.private: @PC_LIBS_REQUIRE@
Requires.private: @PC_REQUIRE_STR@
Cflags: -I"${includedir}"
Libs: -L"${libdir}" -lXISF
Libs.private: -L"${libdir}" @PC_LIBS_REQUIRE@
+1 -1
View File
@@ -89,7 +89,7 @@ std::streamsize StreamBuffer::xsgetn(char_type *s, std::streamsize n)
std::streamsize len = egptr() - gptr();
if(len > 0)
{
std::streamsize c = std::min(n, len);
std::streamsize c = n < len ? n : len;
std::memcpy(s, gptr(), c);
gbump(c);
ret = c;
+22
View File
@@ -78,6 +78,17 @@ void benchmarkType(float avg, float stdDev)
std::cout << "LZ4HC compression \tElapsed time: " << timer.elapsed() << " " << "ms\tSpeed: "
<< size/1024.0/1.024/timer.elapsed() << "MiB/s\tRatio: " << baseSize/xisfImage.size() << std::endl;
}
if(DataBlock::CompressionCodecSupported(DataBlock::ZSTD))
{
image.setCompression(DataBlock::ZSTD);
timer.start();
XISFWriter writer;
writer.writeImage(image);
ByteArray xisfImage;
writer.save(xisfImage);
std::cout << "ZSTD compression \tElapsed time: " << timer.elapsed() << " " << "ms\tSpeed: "
<< size/1024.0/1.024/timer.elapsed() << "MiB/s\tRatio: " << baseSize/xisfImage.size() << std::endl;
}
image.setByteshuffling(true);
{
image.setCompression(DataBlock::Zlib);
@@ -109,6 +120,17 @@ void benchmarkType(float avg, float stdDev)
std::cout << "LZ4HC compression SH\tElapsed time: " << timer.elapsed() << " " << "ms\tSpeed: "
<< size/1024.0/1.024/timer.elapsed() << "MiB/s\tRatio: " << baseSize/xisfImage.size() << std::endl;
}
if(DataBlock::CompressionCodecSupported(DataBlock::ZSTD))
{
image.setCompression(DataBlock::ZSTD);
timer.start();
XISFWriter writer;
writer.writeImage(image);
ByteArray xisfImage;
writer.save(xisfImage);
std::cout << "ZSTD compression SH\tElapsed time: " << timer.elapsed() << " " << "ms\tSpeed: "
<< size/1024.0/1.024/timer.elapsed() << "MiB/s\tRatio: " << baseSize/xisfImage.size() << std::endl;
}
}
void benchmark()
+1 -1
View File
@@ -52,7 +52,7 @@ void sha1(uint8_t *data, size_t len, uint8_t *hash)
nlen += 64 - nlen % 64;
tmp.resize(nlen, 0);
size_t ml = len * 8;
uint64_t ml = len * 8;
tmp[nlen - 1] = ml & 0xff;
tmp[nlen - 2] = ml >> 8 & 0xff;
tmp[nlen - 3] = ml >> 16 & 0xff;
+35 -3
View File
@@ -108,8 +108,8 @@ static std::map<Variant::Type, const char*> idToType = {
{Variant::Type::UI32Matrix, "UI32Matrix"},
{Variant::Type::I64Matrix, "I64Matrix"},
{Variant::Type::UI64Matrix, "UI64Matrix"},
{Variant::Type::F32Matrix, "I8Matrix"},
{Variant::Type::F64Matrix, "UI8Matrix"},
{Variant::Type::F32Matrix, "F32Matrix"},
{Variant::Type::F64Matrix, "F64Matrix"},
};
template<typename T>
@@ -196,9 +196,12 @@ void deserializeVariant(const pugi::xml_node &node, Variant &variant, const Byte
std::string type = node.attribute("type").as_string();
Variant::Type typeId = typeToId[type];
if(typeId == Variant::Type::String && !node.attribute("location"))
if(typeId == Variant::Type::String)
{
if(!node.attribute("location"))
variant.setValue(node.text().as_string());
else
variant.setValue(String(data.constData(), data.size()));
}
else if(node.attribute("value"))
{
@@ -400,6 +403,7 @@ Variant variantFromString(Variant::Type type, const String &str)
Variant::Type Variant::type() const
{
int idx = _value.index();
return (Variant::Type)_value.index();
}
@@ -430,6 +434,32 @@ String Variant::toString() const
return ss.str();
};
auto matrixString = [](auto matrix) {
std::stringstream ss;
ss << "{";
for(int i=0; i<matrix.rows(); i++)
{
ss << "{";
for(int o=0; o<matrix.cols(); o++)
{
#if __GNUC__ >= 11 || __clang__
char str[128] = {0};
char *end = str + sizeof(str);
std::to_chars(str, end, matrix(i, o));
ss << str;
#else
ss << std::to_string(matrix(i, o));
#endif
if(o < matrix.cols() - 1)
ss << ",";
}
ss << "}";
if(i < matrix.rows() - 1)
ss << ",";
}
return ss.str();
};
switch(type())
{
case Variant::Type::Int8: toChars<Int8>(_value, str, end); break;
@@ -454,6 +484,8 @@ String Variant::toString() const
case Variant::Type::UI64Vector: string = vectorString(std::get<UI64Vector>(_value)); break;
case Variant::Type::F32Vector: string = vectorString(std::get<F32Vector>(_value)); break;
case Variant::Type::F64Vector: string = vectorString(std::get<F64Vector>(_value)); break;
case Variant::Type::F32Matrix: string = matrixString(std::get<F32Matrix>(_value)); break;
case Variant::Type::F64Matrix: string = matrixString(std::get<F64Matrix>(_value)); break;
case Variant::Type::String: string = std::get<String>(_value); break;
case Variant::Type::TimePoint:
{