Draw circles around peaks

This commit is contained in:
2019-09-28 11:51:04 +02:00
parent b5d63a6185
commit 4cc58de7a1
2 changed files with 76 additions and 28 deletions
+49 -27
View File
@@ -7,10 +7,36 @@
#include <math.h>
#include <memory.h>
class Peak
{
uint32_t m_v;
uint32_t m_x,m_y;
public:
Peak() : m_v(0), m_x(0), m_y(0) {}
Peak(uint32_t v, uint32_t x, uint32_t y) : m_v(v), m_x(x), m_y(y) {}
uint32_t v() const { return m_v; }
uint32_t x() const { return m_x; }
uint32_t y() const { return m_y; }
double distance(const Peak &d) const
{
uint32_t dx = m_x-d.m_x;
uint32_t dy = m_y-d.m_y;
return dx*dx + dy*dy;
}
bool operator <(const Peak &d) const
{
return m_v > d.m_v;
}
};
class RawImageAbs
{
public:
virtual ~RawImageAbs(){}
virtual bool imageStats(uint64_t *mean, double *stdDev, uint64_t *median, uint64_t *min, uint64_t *max) const = 0;
virtual int findPeaks(uint64_t background, double distance, std::vector<Peak> &peaks) const = 0;
virtual void medianFilter() = 0;
virtual void quarter() = 0;
};
template<typename T>
@@ -24,28 +50,6 @@ class RawImage : public RawImageAbs
return c>=d;
}
public:
class Peak
{
T m_v;
uint32_t m_x,m_y;
public:
Peak() : m_v(0), m_x(0), m_y(0) {}
Peak(T v, uint32_t x, uint32_t y) : m_v(v), m_x(x), m_y(y) {}
T v() const { return m_v; }
uint32_t x() const { return m_x; }
uint32_t y() const { return m_y; }
double distance(const Peak &d) const
{
uint32_t dx = m_x-d.m_x;
uint32_t dy = m_y-d.m_y;
return dx*dx + dy*dy;
}
bool operator <(const Peak &d) const
{
return m_v > d.m_v;
}
};
RawImage()
{
m_width = m_height = 0;
@@ -122,7 +126,7 @@ public:
if(y>=m_height)y=0;
return m_img[y*m_width+x];
}
void findPeaks(T background, double distance, std::vector<Peak> &peaks, T sigma) const
int findPeaks(uint64_t background, double distance, std::vector<Peak> &peaks) const
{
std::vector<Peak> tmpPeaks;
const int r = 1;
@@ -135,13 +139,14 @@ public:
checkPixel(c, o+r, i-r) && checkPixel(c, o-r, i) && checkPixel(c, o+r, i)
&& checkPixel(c, o-r, i+r) && checkPixel(c, o, i+r) && checkPixel(c, o+r, i+r))
{
tmpPeaks.append(Peak(c, o, i));
tmpPeaks.push_back(Peak(c, o, i));
}
}
}
std::qsort(tmpPeaks.begin(), tmpPeaks.end());
tmpPeaks.resize(10000);
int num = tmpPeaks.size();
std::sort(tmpPeaks.begin(), tmpPeaks.end());
tmpPeaks.resize(std::min(num, 10000));
uint32_t d = distance*distance;
for(const Peak &p : tmpPeaks)
{
@@ -156,9 +161,10 @@ public:
}
if(pass)
{
peaks.append(p);
peaks.push_back(p);
}
}
return num;
}
void medianFilter()
{
@@ -178,6 +184,22 @@ public:
}
m_img = std::move(tmp);
}
void quarter()
{
std::vector<T> tmp;
tmp.resize(m_width*m_height);
uint32_t d = 0;
for(uint32_t i=0;i<m_height;i+=2)
{
for(uint32_t o=0;o<m_width;o+=2)
{
tmp[d++] = m_img[i*m_width+o];
}
}
m_img = tmp;
m_width /= 2;
m_height /= 2;
}
};
#endif // RAWIMAGE_H